Genetic markers are the basic tool of the geneticist
Three properties define a genetic marker:
- locus-specific
- polymorphic in the studied population
- easily genotyped
The quality of a genetic marker is typically measured by its:
- Heterozygosity in the population of interest.
- PIC (Botstein et al., 1980):
- = Polymorphism Information Content
- = The probability that one could identify which homologue of a given parent was transmitted to a given offspring, the other parent being genotyped as well.
- = probability that the parent is heterozygous x probability that the offspring is informative
